SHOGoiN Cell Transcriptome: GSM1269007

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269007


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T42Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000167601 AXL AXL receptor tyrosine kinase 97.4865
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 78.1005
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 68.5951
4 ENSG00000106366 SERPINE1 serpin family E member 1 68.0245
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 56.3303
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 45.3710
7 ENSG00000258017 NA 37.2413
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 37.1397
9 ENSG00000075624 ACTB actin beta 36.7020
10 ENSG00000123416 TUBA1B tubulin alpha 1b 34.5758

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277081 NA -0.1080
57170 ENSG00000277077 NA -0.1080
57169 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1080
57167 ENSG00000277073 MIR6131 microRNA 6131 -0.1080
57166 ENSG00000277066 NA -0.1080
57164 ENSG00000277063 MIR8084 microRNA 8084 -0.1080
57163 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1080
10 ENSG00000123416 TUBA1B tubulin alpha 1b 34.5758
9 ENSG00000075624 ACTB actin beta 36.7020
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 37.1397

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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