SHOGoiN Cell Transcriptome: GSM1269010

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269010


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T44Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 98.9866
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 76.2458
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 68.5446
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 62.5844
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 57.7787
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.6665
7 ENSG00000115414 FN1 fibronectin 1 39.4325
8 ENSG00000075624 ACTB actin beta 37.8185
9 ENSG00000137801 THBS1 thrombospondin 1 35.1407
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 32.5112

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.1130
57169 ENSG00000277024 NA -0.1130
57167 ENSG00000277022 NA -0.1130
57165 ENSG00000277020 NA -0.1130
57164 ENSG00000277017 NA -0.1130
57163 ENSG00000277014 MIR3179-4 microRNA 3179-4 -0.1130
57162 ENSG00000277013 NA -0.1130
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 32.5112
9 ENSG00000137801 THBS1 thrombospondin 1 35.1407
8 ENSG00000075624 ACTB actin beta 37.8185

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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