SHOGoiN Cell Transcriptome: GSM1269012

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269012


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T46Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 108.7257
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 93.0009
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 88.9846
4 ENSG00000011465 DCN decorin 78.1764
5 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 44.2545
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 39.6271
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.8615
8 ENSG00000088448 ANKRD10 ankyrin repeat domain 10 30.1297
9 ENSG00000187109 NAP1L1 nucleosome assembly protein 1 like 1 28.5437
10 ENSG00000166710 B2M beta-2-microglobulin 26.0527

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0837
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0837
58733 ENSG00000285992 novel transcript -0.0837
58732 ENSG00000285991 novel transcript -0.0837
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0837
58730 ENSG00000285989 TEC -0.0837
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0837
58728 ENSG00000285987 NA -0.0837
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0837
58726 ENSG00000285985 NA -0.0837

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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