SHOGoiN Cell Transcriptome: GSM1269016

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269016


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T50Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 83.5628
2 ENSG00000167601 AXL AXL receptor tyrosine kinase 80.7790
3 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 75.4489
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 66.5954
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 54.5407
6 ENSG00000075624 ACTB actin beta 48.0908
7 ENSG00000115414 FN1 fibronectin 1 45.8140
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 35.4022
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 34.6891
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.4509

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277063 MIR8084 microRNA 8084 -0.1121
57169 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1121
57167 ENSG00000277057 MIR6779 microRNA 6779 -0.1121
57166 ENSG00000277056 NA -0.1121
57164 ENSG00000277052 MIR6763 microRNA 6763 -0.1121
57163 ENSG00000277051 NA -0.1121
57162 ENSG00000277050 NA -0.1121
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.4509
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 34.6891
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 35.4022

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...