SHOGoiN Cell Transcriptome: GSM1269017

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269017


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T51Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 147.8280
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 140.5561
3 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 64.3525
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.3210
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 38.8086
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.8351
7 ENSG00000115414 FN1 fibronectin 1 32.2155
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.7019
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 23.6036
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 19.2053

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277203 F8A1 coagulation factor VIII associated 1 -0.0437
57169 ENSG00000277202 MIR8063 microRNA 8063 -0.0437
57167 ENSG00000277200 NA -0.0437
57166 ENSG00000277199 LINC01632 long intergenic non-protein coding RNA 1632 -0.0437
57165 ENSG00000277198 RN7SL270P RNA, 7SL, cytoplasmic 270, pseudogene -0.0437
57163 ENSG00000277196 proline dehydrogenase 1, mitochondrial -0.0437
57162 ENSG00000277194 SNORD22 small nucleolar RNA, C/D box 22 -0.0437
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 19.2053
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 23.6036
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.7019

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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