SHOGoiN Cell Transcriptome: GSM1269017

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269017


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T51Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 147.8280
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 140.5561
3 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 64.3525
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.3210
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH dehydrogenase 4 38.8086
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.8351
7 ENSG00000115414 FN1 fibronectin 1 32.2155
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.7019
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase 6 23.6036
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH dehydrogenase 5 19.2053

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0437
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0437
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0437
60672 ENSG00000283118 NA -0.0437
60671 ENSG00000283110 NA -0.0437
60670 ENSG00000283108 NA -0.0437
60669 ENSG00000283103 NA -0.0437
60668 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0437
60667 ENSG00000283098 NA -0.0437
60666 ENSG00000283097 NA -0.0437

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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