SHOGoiN Cell Transcriptome: GSM1269020

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269020


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T54Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 91.8983
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 86.8912
3 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 77.2838
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 48.9192
5 ENSG00000167601 AXL AXL receptor tyrosine kinase 40.3705
6 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 37.2497
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 33.6296
8 ENSG00000075624 ACTB actin, beta 31.9790
9 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 31.1745
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.8925

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1167
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.1167
60673 ENSG00000283118 NA -0.1167
60672 ENSG00000283110 NA -0.1167
60671 ENSG00000283108 NA -0.1167
60670 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1167
60669 ENSG00000283098 NA -0.1167
60668 ENSG00000283097 NA -0.1167
60667 ENSG00000283096 NA -0.1167
60666 ENSG00000283095 NA -0.1167

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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