SHOGoiN Cell Transcriptome: GSM1269021

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269021


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T55Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 105.8508
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 104.1218
3 ENSG00000197061 HIST1H4C histone cluster 1 H4 family member c 52.1948
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 48.9994
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 48.4970
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 45.9896
7 ENSG00000115414 FN1 fibronectin 1 38.5760
8 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 34.2943
9 ENSG00000075624 ACTB actin beta 31.0582
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 28.3834

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277095 NA -0.1034
57169 ENSG00000277089 NA -0.1034
57168 ENSG00000277087 NA -0.1034
57167 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1034
57166 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1034
57164 ENSG00000277081 NA -0.1034
57163 ENSG00000277077 NA -0.1034
57162 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1034
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 28.3834
9 ENSG00000075624 ACTB actin beta 31.0582

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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