SHOGoiN Cell Transcriptome: GSM1269022

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269022


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T56Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 95.7162
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 92.6913
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 63.2032
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 62.9415
5 ENSG00000115414 FN1 fibronectin 1 60.7444
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 35.7480
7 ENSG00000105974 CAV1 caveolin 1 33.2100
8 ENSG00000075624 ACTB actin beta 32.9422
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 32.4553
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 30.5259

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276993 NA -0.1124
57170 ENSG00000276992 NA -0.1124
57169 ENSG00000276991 NA -0.1124
57166 ENSG00000276988 NA -0.1124
57164 ENSG00000276984 NA -0.1124
57163 ENSG00000276980 NA -0.1124
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 30.5259
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 32.4553
8 ENSG00000075624 ACTB actin beta 32.9422
7 ENSG00000105974 CAV1 caveolin 1 33.2100

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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