SHOGoiN Cell Transcriptome: GSM1269023

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269023


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T57Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 96.0722
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 93.0740
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 80.1946
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 49.2819
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 41.1851
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 40.1100
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 39.2843
8 ENSG00000075624 ACTB actin beta 36.2140
9 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 35.9647
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 34.0195

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277073 MIR6131 microRNA 6131 -0.1076
57168 ENSG00000277063 MIR8084 microRNA 8084 -0.1076
57167 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1076
57165 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1076
57164 ENSG00000277057 MIR6779 microRNA 6779 -0.1076
57163 ENSG00000277056 NA -0.1076
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 34.0195
9 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 35.9647
8 ENSG00000075624 ACTB actin beta 36.2140
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 39.2843

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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