SHOGoiN Cell Transcriptome: GSM1269023
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1269023 Profile download | 6000003010000000000000-738 | Sequence Read Archive | SRP033135 | SRP033135_T57 | Pseudo-temporal ordering of individual cells reveals regulators of differentiation | Transcriptome | Myoblast_T0 (Skeletal muscle) | Human | Muscle | RNA-seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 96.0722 |
| 2 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S RNA | 93.0740 |
| 3 | ENSG00000167601 | AXL | AXL receptor tyrosine kinase | 80.1946 |
| 4 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 49.2819 |
| 5 | ENSG00000231991 | ANXA2P2 | annexin A2 pseudogene 2 | 41.1851 |
| 6 | ENSG00000198727 | MT-CYB | mitochondrially encoded cytochrome b | 40.1100 |
| 7 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 39.2843 |
| 8 | ENSG00000075624 | ACTB | actin beta | 36.2140 |
| 9 | ENSG00000251562 | MALAT1 | metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) | 35.9647 |
| 10 | ENSG00000159251 | ACTC1 | actin, alpha, cardiac muscle 1 | 34.0195 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 57170 | ENSG00000277073 | MIR6131 | microRNA 6131 | -0.1076 |
| 57168 | ENSG00000277063 | MIR8084 | microRNA 8084 | -0.1076 |
| 57167 | ENSG00000277062 | RN7SL88P | RNA, 7SL, cytoplasmic 88, pseudogene | -0.1076 |
| 57165 | ENSG00000277058 | HNRNPCL3 | heterogeneous nuclear ribonucleoprotein C-like 3 | -0.1076 |
| 57164 | ENSG00000277057 | MIR6779 | microRNA 6779 | -0.1076 |
| 57163 | ENSG00000277056 | NA | -0.1076 | |
| 10 | ENSG00000159251 | ACTC1 | actin, alpha, cardiac muscle 1 | 34.0195 |
| 9 | ENSG00000251562 | MALAT1 | metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) | 35.9647 |
| 8 | ENSG00000075624 | ACTB | actin beta | 36.2140 |
| 7 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 39.2843 |
