SHOGoiN Cell Transcriptome: GSM1269024

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269024


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T58Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 107.0081
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 94.6631
3 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 57.1244
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 56.3526
5 ENSG00000115414 FN1 fibronectin 1 50.4866
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 44.5298
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 37.2972
8 ENSG00000075624 ACTB actin beta 37.1746
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 36.7478
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 35.1859

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277103 NA -0.1008
57168 ENSG00000277099 NA -0.1008
57166 ENSG00000277096 NA -0.1008
57165 ENSG00000277095 NA -0.1008
57163 ENSG00000277089 NA -0.1008
57162 ENSG00000277087 NA -0.1008
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 35.1859
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 36.7478
8 ENSG00000075624 ACTB actin beta 37.1746
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 37.2972

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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