SHOGoiN Cell Transcriptome: GSM1269025

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269025


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T59Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 83.3903
2 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 71.8775
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 60.5374
4 ENSG00000167601 AXL AXL receptor tyrosine kinase 60.2042
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 55.0216
6 ENSG00000075624 ACTB actin beta 50.3695
7 ENSG00000106366 SERPINE1 serpin family E member 1 42.6573
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 38.3508
9 ENSG00000105974 CAV1 caveolin 1 36.4875
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 34.0319

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1241
57170 ENSG00000277057 MIR6779 microRNA 6779 -0.1241
57169 ENSG00000277056 NA -0.1241
57167 ENSG00000277052 MIR6763 microRNA 6763 -0.1241
57166 ENSG00000277051 NA -0.1241
57165 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.1241
57163 ENSG00000277047 NA -0.1241
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 34.0319
9 ENSG00000105974 CAV1 caveolin 1 36.4875
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 38.3508

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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