SHOGoiN Cell Transcriptome: GSM1269026

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269026


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T60Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 105.5390
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 99.3858
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 64.4040
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 49.3249
5 ENSG00000167601 AXL AXL receptor tyrosine kinase 47.3024
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 45.8400
7 ENSG00000115414 FN1 fibronectin 1 43.3047
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 35.6607
9 ENSG00000137801 THBS1 thrombospondin 1 33.6192
10 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 33.0115

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.1092
57170 ENSG00000277047 NA -0.1092
57168 ENSG00000277041 NA -0.1092
57167 ENSG00000277040 NA -0.1092
57166 ENSG00000277039 NA -0.1092
57165 ENSG00000277035 NA -0.1092
57164 ENSG00000277034 NA -0.1092
57163 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.1092
57162 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.1092
10 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 33.0115

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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