SHOGoiN Cell Transcriptome: GSM1269028

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269028


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T62Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 112.6584
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 98.7523
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 88.2183
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 75.5099
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 49.1805
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.8515
7 ENSG00000102265 TIMP1 TIMP metallopeptidase inhibitor 1 33.2602
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 29.4994
9 ENSG00000075624 ACTB actin beta 29.1678
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 28.4584

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.0883
57169 ENSG00000277047 NA -0.0883
57167 ENSG00000277041 NA -0.0883
57166 ENSG00000277040 NA -0.0883
57165 ENSG00000277039 NA -0.0883
57164 ENSG00000277035 NA -0.0883
57163 ENSG00000277034 NA -0.0883
57162 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.0883
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 28.4584
9 ENSG00000075624 ACTB actin beta 29.1678

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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