SHOGoiN Cell Transcriptome: GSM1269033

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269033


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T66Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 94.0947
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 77.0112
3 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 67.4821
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 55.7716
5 ENSG00000115414 FN1 fibronectin 1 54.8990
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 52.1092
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 47.7694
8 ENSG00000106366 SERPINE1 serpin family E member 1 41.1909
9 ENSG00000075624 ACTB actin beta 38.3781
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 32.1670

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277096 NA -0.1057
57170 ENSG00000277095 NA -0.1057
57168 ENSG00000277089 NA -0.1057
57167 ENSG00000277087 NA -0.1057
57166 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1057
57165 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1057
57163 ENSG00000277081 NA -0.1057
57162 ENSG00000277077 NA -0.1057
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 32.1670
9 ENSG00000075624 ACTB actin beta 38.3781

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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