SHOGoiN Cell Transcriptome: GSM1269034

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269034


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T67Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 91.1296
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 82.9180
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 80.6413
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 52.2589
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 50.9287
6 ENSG00000075624 ACTB actin beta 42.7811
7 ENSG00000105974 CAV1 caveolin 1 40.4212
8 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 40.3509
9 ENSG00000115414 FN1 fibronectin 1 33.0794
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.5660

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277077 NA -0.1122
57170 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1122
57168 ENSG00000277073 MIR6131 microRNA 6131 -0.1122
57167 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.1122
57166 ENSG00000277066 NA -0.1122
57164 ENSG00000277063 MIR8084 microRNA 8084 -0.1122
57163 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1122
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.5660
9 ENSG00000115414 FN1 fibronectin 1 33.0794
8 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 40.3509

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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