SHOGoiN Cell Transcriptome: GSM1269035

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269035


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T68Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 91.3350
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 88.5971
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 77.4030
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 58.1119
5 ENSG00000115414 FN1 fibronectin 1 52.7707
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 51.9897
7 ENSG00000075624 ACTB actin beta 43.7131
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 36.5855
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 30.1133
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 29.7093

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277077 NA -0.1116
57170 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1116
57168 ENSG00000277073 MIR6131 microRNA 6131 -0.1116
57167 ENSG00000277067 uncharacterized LOC102724843 -0.1116
57166 ENSG00000277066 NA -0.1116
57164 ENSG00000277063 MIR8084 microRNA 8084 -0.1116
57163 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1116
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 29.7093
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 30.1133
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 36.5855

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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