SHOGoiN Cell Transcriptome: GSM1269038

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269038


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T69Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 97.1945
2 ENSG00000167601 AXL AXL receptor tyrosine kinase 83.4566
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 81.8936
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 79.7295
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 49.6277
6 ENSG00000075624 ACTB actin beta 44.3312
7 ENSG00000115414 FN1 fibronectin 1 43.0277
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 32.1564
9 ENSG00000106366 SERPINE1 serpin family E member 1 30.9920
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.2647

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277057 MIR6779 microRNA 6779 -0.1033
57170 ENSG00000277056 NA -0.1033
57168 ENSG00000277052 MIR6763 microRNA 6763 -0.1033
57167 ENSG00000277051 NA -0.1033
57166 ENSG00000277050 NA -0.1033
57165 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.1033
57164 ENSG00000277047 NA -0.1033
57162 ENSG00000277043 EEF1A1P42 eukaryotic translation elongation factor 1 alpha 1 pseudogene 42 -0.1033
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.2647
9 ENSG00000106366 SERPINE1 serpin family E member 1 30.9920

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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