SHOGoiN Cell Transcriptome: GSM1269039

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269039


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T70Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 104.5971
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 89.3503
3 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 71.3443
4 ENSG00000167601 AXL AXL receptor tyrosine kinase 63.4361
5 ENSG00000075624 ACTB actin beta 60.3069
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 49.9624
7 ENSG00000115414 FN1 fibronectin 1 37.2460
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 31.4690
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.1129
10 ENSG00000184009 ACTG1 actin gamma 1 28.4925

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1047
57169 ENSG00000277073 MIR6131 microRNA 6131 -0.1047
57168 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.1047
57167 ENSG00000277067 uncharacterized LOC102724843 -0.1047
57166 ENSG00000277066 NA -0.1047
57164 ENSG00000277063 MIR8084 microRNA 8084 -0.1047
57163 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1047
10 ENSG00000184009 ACTG1 actin gamma 1 28.4925
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.1129
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 31.4690

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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