SHOGoiN Cell Transcriptome: GSM1269041

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269041


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T72Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 207.6552
2 ENSG00000105640 RPL18A ribosomal protein L18a 65.2406
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 29.6369
4 ENSG00000075624 ACTB actin beta 23.7030
5 ENSG00000115414 FN1 fibronectin 1 23.7030
6 ENSG00000126432 PRDX5 peroxiredoxin 5 17.7691
7 ENSG00000149925 ALDOA aldolase, fructose-bisphosphate A 17.7691
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 17.7691
9 ENSG00000033050 ABCF2 ATP binding cassette subfamily F member 2 11.8351
10 ENSG00000034510 TMSB10 thymosin beta 10 11.8351

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277363 SRCIN1 SRC kinase signaling inhibitor 1 -0.0328
57169 ENSG00000277358 NA -0.0328
57168 ENSG00000277357 NPAP1P7 nuclear pore associated protein 1 pseudogene 7 -0.0328
57166 ENSG00000277352 NA -0.0328
57165 ENSG00000277351 NA -0.0328
57164 ENSG00000277350 NA -0.0328
57163 ENSG00000277349 NA -0.0328
10 ENSG00000034510 TMSB10 thymosin beta 10 11.8351
9 ENSG00000033050 ABCF2 ATP binding cassette subfamily F member 2 11.8351
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 17.7691

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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