SHOGoiN Cell Transcriptome: GSM1269041

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269041


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T72Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 207.6552
2 ENSG00000105640 RPL18A ribosomal protein L18a 65.2406
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 29.6369
4 ENSG00000075624 ACTB actin, beta 23.7030
5 ENSG00000115414 FN1 fibronectin 1 23.7030
6 ENSG00000126432 PRDX5 peroxiredoxin 5 17.7691
7 ENSG00000149925 ALDOA aldolase A, fructose-bisphosphate 17.7691
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 17.7691
9 ENSG00000033050 ABCF2 ATP-binding cassette, sub-family F (GCN20), member 2 11.8351
10 ENSG00000034510 TMSB10 thymosin beta 10 11.8351

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0328
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0328
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0328
60672 ENSG00000283118 NA -0.0328
60671 ENSG00000283117 NA -0.0328
60670 ENSG00000283110 NA -0.0328
60669 ENSG00000283108 NA -0.0328
60668 ENSG00000283103 NA -0.0328
60667 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0328
60666 ENSG00000283098 NA -0.0328

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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