SHOGoiN Cell Transcriptome: GSM1269044

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269044


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T74Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 110.7009
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 83.4984
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 61.8829
4 ENSG00000115414 FN1 fibronectin 1 59.9153
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 49.0213
6 ENSG00000213639 PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 38.6804
7 ENSG00000105974 CAV1 caveolin 1, caveolae protein, 22kDa 36.6840
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 33.9408
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 32.4255
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 32.2460

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1055
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.1055
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1055
60672 ENSG00000283118 NA -0.1055
60671 ENSG00000283110 NA -0.1055
60670 ENSG00000283108 NA -0.1055
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1055
60668 ENSG00000283098 NA -0.1055
60667 ENSG00000283097 NA -0.1055
60666 ENSG00000283096 NA -0.1055

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...