SHOGoiN Cell Transcriptome: GSM1269049

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269049


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T79Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 186.0573
2 ENSG00000085063 CD59 CD59 molecule (CD59 blood group) 39.8946
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 35.0106
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.4059
5 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 29.5100
6 ENSG00000164111 ANXA5 annexin A5 29.3488
7 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 29.2627
8 ENSG00000242299 NA 28.2917
9 ENSG00000124783 SSR1 signal sequence receptor subunit 1 24.9816
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 24.6593

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277234 RNU1-5P RNA, U1 small nuclear 5, pseudogene -0.0507
57170 ENSG00000277233 NA -0.0507
57169 ENSG00000277232 GTSE1-DT GTSE1 divergent transcript -0.0507
57167 ENSG00000277229 NA -0.0507
57166 ENSG00000277228 NA -0.0507
57165 ENSG00000277227 NA -0.0507
57163 ENSG00000277224 HIST1H2BF histone cluster 1 H2B family member f -0.0507
57162 ENSG00000277223 NA -0.0507
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 24.6593
9 ENSG00000124783 SSR1 signal sequence receptor subunit 1 24.9816

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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