SHOGoiN Cell Transcriptome: GSM1269052

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269052


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T81Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 96.2723
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 93.3367
3 ENSG00000115414 FN1 fibronectin 1 83.1950
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 71.6642
5 ENSG00000120708 TGFBI transforming growth factor beta induced 61.4685
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 52.1944
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.9403
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.4434
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 31.3625
10 ENSG00000106366 SERPINE1 serpin family E member 1 30.3780

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277073 MIR6131 microRNA 6131 -0.0876
57169 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.0876
57168 ENSG00000277067 uncharacterized LOC102724843 -0.0876
57167 ENSG00000277066 NA -0.0876
57165 ENSG00000277063 MIR8084 microRNA 8084 -0.0876
57164 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.0876
57162 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.0876
10 ENSG00000106366 SERPINE1 serpin family E member 1 30.3780
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 31.3625
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.4434

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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