SHOGoiN Cell Transcriptome: GSM1269053

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269053


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T82Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000177954 RPS27 ribosomal protein S27 65.5291
2 ENSG00000100316 RPL3 ribosomal protein L3 49.1354
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 49.1354
4 ENSG00000269968 novel transcript, antisense to GAPDH 49.1354
5 ENSG00000041357 PSMA4 proteasome subunit alpha 4 32.7418
6 ENSG00000071082 RPL31 ribosomal protein L31 32.7418
7 ENSG00000084207 GSTP1 glutathione S-transferase pi 1 32.7418
8 ENSG00000110955 ATP5F1B ATP synthase F1 subunit beta 32.7418
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 32.7418
10 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 32.7418

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0455
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0455
58733 ENSG00000285992 novel transcript -0.0455
58732 ENSG00000285991 novel transcript -0.0455
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0455
58730 ENSG00000285989 TEC -0.0455
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0455
58728 ENSG00000285987 NA -0.0455
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0455
58726 ENSG00000285985 NA -0.0455

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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