SHOGoiN Cell Transcriptome: GSM1269053

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269053


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T82Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 215.5152
2 ENSG00000105640 RPL18A ribosomal protein L18a 58.0037
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 49.7136
4 ENSG00000126432 PRDX5 peroxiredoxin 5 33.1334
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 16.5532
6 ENSG00000227081 NA 16.5532
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 16.5532
8 ENSG00000065882 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 12.4082
9 ENSG00000142669 SH3BGRL3 SH3 domain binding glutamate-rich protein like 3 12.4082
10 ENSG00000168653 NDUFS5 NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase) 12.4082

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0269
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0269
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0269
60672 ENSG00000283118 NA -0.0269
60671 ENSG00000283117 NA -0.0269
60670 ENSG00000283110 NA -0.0269
60669 ENSG00000283108 NA -0.0269
60668 ENSG00000283103 NA -0.0269
60667 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0269
60666 ENSG00000283098 NA -0.0269

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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