SHOGoiN Cell Transcriptome: GSM1269055

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269055


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T83Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 92.1801
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 88.2764
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 57.4186
4 ENSG00000115414 FN1 fibronectin 1 53.4383
5 ENSG00000075624 ACTB actin beta 48.9806
6 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 44.2787
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 41.6543
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.6288
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 38.3739
10 ENSG00000105974 CAV1 caveolin 1 38.0094

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277103 NA -0.1091
57166 ENSG00000277099 NA -0.1091
57164 ENSG00000277096 NA -0.1091
57163 ENSG00000277095 NA -0.1091
10 ENSG00000105974 CAV1 caveolin 1 38.0094
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 38.3739
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.6288
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 41.6543
6 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 44.2787
5 ENSG00000075624 ACTB actin beta 48.9806

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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