SHOGoiN Cell Transcriptome: GSM1269055

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269055


Profile download
8000301-738Sequence Read ArchiveSRP033135SRP033135_T83Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 92.1801
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 88.2764
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 57.4186
4 ENSG00000115414 FN1 fibronectin 1 53.4383
5 ENSG00000075624 ACTB actin, beta 48.9806
6 ENSG00000213639 PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 44.2787
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 41.6543
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.6288
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 38.3739
10 ENSG00000105974 CAV1 caveolin 1, caveolae protein, 22kDa 38.0094

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1091
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.1091
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1091
60672 ENSG00000283118 NA -0.1091
60671 ENSG00000283110 NA -0.1091
60670 ENSG00000283108 NA -0.1091
60669 ENSG00000283103 NA -0.1091
60668 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1091
60667 ENSG00000283098 NA -0.1091
60666 ENSG00000283097 NA -0.1091

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...