SHOGoiN Cell Transcriptome: GSM1269056

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269056


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T84Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 96.6411
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 93.1622
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 65.0773
4 ENSG00000167601 AXL AXL receptor tyrosine kinase 57.4847
5 ENSG00000075624 ACTB actin beta 55.5125
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 46.3540
7 ENSG00000137801 THBS1 thrombospondin 1 38.6937
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 29.7299
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 29.0696
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 27.6392

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277099 NA -0.1157
57168 ENSG00000277096 NA -0.1157
57167 ENSG00000277095 NA -0.1157
57165 ENSG00000277089 NA -0.1157
57164 ENSG00000277087 NA -0.1157
57163 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1157
57162 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1157
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 27.6392
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 29.0696
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 29.7299

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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