SHOGoiN Cell Transcriptome: GSM1269062

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269062


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T88Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 116.0394
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 96.5787
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 91.0746
4 ENSG00000115414 FN1 fibronectin 1 68.1781
5 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 36.1454
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 33.6792
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 32.7320
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.3218
9 ENSG00000167601 AXL AXL receptor tyrosine kinase 29.4362
10 ENSG00000255248 MIR100HG mir-100-let-7a-2-mir-125b-1 cluster host gene 25.1204

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277089 NA -0.0966
57169 ENSG00000277087 NA -0.0966
57168 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0966
57167 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0966
57165 ENSG00000277081 NA -0.0966
57164 ENSG00000277077 NA -0.0966
57163 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.0966
10 ENSG00000255248 MIR100HG mir-100-let-7a-2-mir-125b-1 cluster host gene 25.1204
9 ENSG00000167601 AXL AXL receptor tyrosine kinase 29.4362
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.3218

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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