SHOGoiN Cell Transcriptome: GSM1269064

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269064


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T90Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 138.2044
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 111.4000
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 66.8824
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 37.1152
5 ENSG00000137801 THBS1 thrombospondin 1 33.4276
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 31.8289
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 27.9069
8 ENSG00000184009 ACTG1 actin gamma 1 27.7150
9 ENSG00000075624 ACTB actin beta 25.4662
10 ENSG00000115414 FN1 fibronectin 1 23.6331

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277119 NA -0.0912
57170 ENSG00000277118 NA -0.0912
57169 ENSG00000277117 ICOS ligand -0.0912
57166 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0912
57165 ENSG00000277109 NA -0.0912
57164 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0912
10 ENSG00000115414 FN1 fibronectin 1 23.6331
9 ENSG00000075624 ACTB actin beta 25.4662
8 ENSG00000184009 ACTG1 actin gamma 1 27.7150
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 27.9069

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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