SHOGoiN Cell Transcriptome: GSM1269068

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269068


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T92Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 132.9501
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 99.2558
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 63.7418
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 46.9766
5 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 44.0013
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 43.5615
7 ENSG00000127603 MACF1 microtubule-actin crosslinking factor 1 27.2102
8 ENSG00000184009 ACTG1 actin gamma 1 26.8480
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 23.9934
10 ENSG00000105974 CAV1 caveolin 1 23.0189

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277095 NA -0.1023
57169 ENSG00000277089 NA -0.1023
57168 ENSG00000277087 NA -0.1023
57167 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1023
57166 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1023
57164 ENSG00000277081 NA -0.1023
57163 ENSG00000277077 NA -0.1023
57162 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1023
10 ENSG00000105974 CAV1 caveolin 1 23.0189
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 23.9934

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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