SHOGoiN Cell Transcriptome: GSM1269072

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269072


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T95Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 110.0997
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 98.0254
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 86.9009
4 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 48.6221
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 46.8396
6 ENSG00000115414 FN1 fibronectin 1 45.1872
7 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 37.3480
8 ENSG00000226608 FTLP3 ferritin light chain pseudogene 3 31.7142
9 ENSG00000087086 FTL ferritin light chain 30.0097
10 ENSG00000150347 ARID5B AT-rich interaction domain 5B 25.9502

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0981
57169 ENSG00000277109 NA -0.0981
57168 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0981
57165 ENSG00000277103 NA -0.0981
57162 ENSG00000277099 NA -0.0981
10 ENSG00000150347 ARID5B AT-rich interaction domain 5B 25.9502
9 ENSG00000087086 FTL ferritin light chain 30.0097
8 ENSG00000226608 FTLP3 ferritin light chain pseudogene 3 31.7142
7 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 37.3480
6 ENSG00000115414 FN1 fibronectin 1 45.1872

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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