SHOGoiN Cell Transcriptome: GSM1269073

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269073


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T96Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 109.9318
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 88.4865
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 72.6294
4 ENSG00000115414 FN1 fibronectin 1 63.5284
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 39.6215
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.1481
7 ENSG00000102265 TIMP1 TIMP metallopeptidase inhibitor 1 36.0368
8 ENSG00000184009 ACTG1 actin gamma 1 31.8681
9 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 31.1224
10 ENSG00000075624 ACTB actin beta 28.5889

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277141 NA -0.1066
57170 ENSG00000277138 MIR6509 microRNA 6509 -0.1066
57168 ENSG00000277136 NA -0.1066
57167 ENSG00000277135 NA -0.1066
57166 ENSG00000277133 NA -0.1066
57165 ENSG00000277130 NA -0.1066
57164 ENSG00000277129 NA -0.1066
57163 ENSG00000277128 NA -0.1066
57162 ENSG00000277127 NA -0.1066
10 ENSG00000075624 ACTB actin beta 28.5889

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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