SHOGoiN Cell Transcriptome: GSM1269074

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269074


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T97Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 186.6553
2 ENSG00000124491 F13A1 coagulation factor XIII A chain 41.2586
3 ENSG00000167552 TUBA1A tubulin alpha 1a 38.8969
4 ENSG00000075624 ACTB actin beta 35.1632
5 ENSG00000172403 SYNPO2 synaptopodin 2 28.0562
6 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 27.9616
7 ENSG00000137801 THBS1 thrombospondin 1 24.5883
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 24.3117
9 ENSG00000180730 SHISA2 shisa family member 2 23.0490
10 ENSG00000138435 CHRNA1 cholinergic receptor nicotinic alpha 1 subunit 22.5031

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277142 LINC00235 long intergenic non-protein coding RNA 235 -0.0879
57170 ENSG00000277141 NA -0.0879
57169 ENSG00000277138 MIR6509 microRNA 6509 -0.0879
57167 ENSG00000277136 NA -0.0879
57166 ENSG00000277135 NA -0.0879
57165 ENSG00000277133 NA -0.0879
57164 ENSG00000277130 NA -0.0879
57163 ENSG00000277129 NA -0.0879
57162 ENSG00000277128 NA -0.0879
10 ENSG00000138435 CHRNA1 cholinergic receptor nicotinic alpha 1 subunit 22.5031

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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