SHOGoiN Cell Transcriptome: GSM1269074

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269074


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T97Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 186.6553
2 ENSG00000124491 F13A1 coagulation factor XIII, A1 polypeptide 41.2586
3 ENSG00000167552 TUBA1A tubulin, alpha 1a 38.8969
4 ENSG00000075624 ACTB actin, beta 35.1632
5 ENSG00000172403 SYNPO2 synaptopodin 2 28.0562
6 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 27.9616
7 ENSG00000137801 THBS1 thrombospondin 1 24.5883
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 24.3117
9 ENSG00000180730 SHISA2 shisa family member 2 23.0490
10 ENSG00000138435 CHRNA1 cholinergic receptor, nicotinic, alpha 1 (muscle) 22.5031

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0879
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0879
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0879
60672 ENSG00000283118 NA -0.0879
60671 ENSG00000283110 NA -0.0879
60670 ENSG00000283108 NA -0.0879
60669 ENSG00000283103 NA -0.0879
60668 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0879
60667 ENSG00000283098 NA -0.0879
60666 ENSG00000283097 NA -0.0879

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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