SHOGoiN Cell Transcriptome: GSM1269075

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269075


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T98Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 129.5190
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 72.6105
3 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 53.0190
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 51.0873
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 37.4151
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 33.4602
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 30.7689
8 ENSG00000075624 ACTB actin beta 30.1534
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.3593
10 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 27.6390

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277120 MIR6089 microRNA 6089 -0.1113
57169 ENSG00000277119 NA -0.1113
57168 ENSG00000277118 NA -0.1113
57167 ENSG00000277117 ICOS ligand -0.1113
57164 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1113
57163 ENSG00000277109 NA -0.1113
57162 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1113
10 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 27.6390
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.3593
8 ENSG00000075624 ACTB actin beta 30.1534

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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