SHOGoiN Cell Transcriptome: GSM1269076

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269076


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T99Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 185.6716
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 48.9233
3 ENSG00000075624 ACTB actin beta 46.9113
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 39.1851
5 ENSG00000167552 TUBA1A tubulin alpha 1a 34.4072
6 ENSG00000137801 THBS1 thrombospondin 1 29.3316
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.0303
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 23.8574
9 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 22.0567
10 ENSG00000124491 F13A1 coagulation factor XIII A chain 20.4433

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277081 NA -0.0848
57170 ENSG00000277077 NA -0.0848
57169 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.0848
57167 ENSG00000277073 MIR6131 microRNA 6131 -0.0848
57165 ENSG00000277063 MIR8084 microRNA 8084 -0.0848
57164 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.0848
57162 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.0848
10 ENSG00000124491 F13A1 coagulation factor XIII A chain 20.4433
9 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 22.0567
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 23.8574

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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