SHOGoiN Cell Transcriptome: GSM1269078

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269078


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T100Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 100.9815
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 77.5316
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 61.8270
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 57.6774
5 ENSG00000167601 AXL AXL receptor tyrosine kinase 45.2584
6 ENSG00000075624 ACTB actin beta 34.2497
7 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 33.7624
8 ENSG00000197061 HIST1H4C histone cluster 1 H4 family member c 33.5409
9 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 32.3595
10 ENSG00000123416 TUBA1B tubulin alpha 1b 30.0854

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.1130
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.1130
58733 ENSG00000285992 novel transcript -0.1130
58732 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1130
58731 ENSG00000285989 TEC -0.1130
58730 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1130
58729 ENSG00000285987 NA -0.1130
58728 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1130
58727 ENSG00000285985 NA -0.1130
58726 ENSG00000285984 novel transcript -0.1130

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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