SHOGoiN Cell Transcriptome: GSM1269078

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269078


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T100Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 93.8923
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 91.7676
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 63.8611
4 ENSG00000167601 AXL AXL receptor tyrosine kinase 51.5767
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 47.4900
6 ENSG00000197061 HIST1H4C histone cluster 1 H4 family member c 37.4281
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 36.5244
8 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 34.0822
9 ENSG00000258017 NA 28.7663
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 27.6754

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277063 MIR8084 microRNA 8084 -0.1252
57169 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1252
57167 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1252
57166 ENSG00000277056 NA -0.1252
57164 ENSG00000277053 GTF2IP1 general transcription factor IIi pseudogene 1 -0.1252
57163 ENSG00000277052 MIR6763 microRNA 6763 -0.1252
57162 ENSG00000277051 NA -0.1252
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 27.6754
9 ENSG00000258017 NA 28.7663
8 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 34.0822

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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