SHOGoiN Cell Transcriptome: GSM1269080

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269080


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T101Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 143.6439
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 75.9166
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 71.8139
4 ENSG00000167552 TUBA1A tubulin alpha 1a 39.2868
5 ENSG00000155657 TTN titin 35.8508
6 ENSG00000075624 ACTB actin beta 34.6199
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 33.9468
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 33.0173
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.8762
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 30.5557

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0931
57170 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0931
57168 ENSG00000277081 NA -0.0931
57167 ENSG00000277077 NA -0.0931
57166 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.0931
57164 ENSG00000277073 MIR6131 microRNA 6131 -0.0931
57163 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.0931
57162 ENSG00000277066 NA -0.0931
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 30.5557
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.8762

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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