SHOGoiN Cell Transcriptome: GSM1269082

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269082


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T103Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 87.9079
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 84.9382
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 65.7250
4 ENSG00000184009 ACTG1 actin gamma 1 40.6649
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.7348
6 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 29.8719
7 ENSG00000075624 ACTB actin beta 26.8456
8 ENSG00000124193 SRSF6 serine and arginine rich splicing factor 6 26.0427
9 ENSG00000226608 FTLP3 ferritin light chain pseudogene 3 25.9912
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 25.9294

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277063 MIR8084 microRNA 8084 -0.1240
57169 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1240
57167 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1240
57166 ENSG00000277057 MIR6779 microRNA 6779 -0.1240
57165 ENSG00000277056 NA -0.1240
57163 ENSG00000277052 MIR6763 microRNA 6763 -0.1240
57162 ENSG00000277051 NA -0.1240
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 25.9294
9 ENSG00000226608 FTLP3 ferritin light chain pseudogene 3 25.9912
8 ENSG00000124193 SRSF6 serine and arginine rich splicing factor 6 26.0427

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...