SHOGoiN Cell Transcriptome: GSM1269082

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269082


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T103Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 87.9079
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 84.9382
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 65.7250
4 ENSG00000184009 ACTG1 actin gamma 1 40.6649
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.7348
6 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 29.8719
7 ENSG00000075624 ACTB actin, beta 26.8456
8 ENSG00000124193 SRSF6 serine/arginine-rich splicing factor 6 26.0427
9 ENSG00000226608 FTLP3 ferritin, light polypeptide pseudogene 3 25.9912
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 25.9294

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1240
60674 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1240
60673 ENSG00000283118 NA -0.1240
60672 ENSG00000283110 NA -0.1240
60671 ENSG00000283108 NA -0.1240
60670 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1240
60669 ENSG00000283098 NA -0.1240
60668 ENSG00000283097 NA -0.1240
60667 ENSG00000283096 NA -0.1240
60666 ENSG00000283093 NA -0.1240

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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