SHOGoiN Cell Transcriptome: GSM1269086

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269086


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T105Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 118.3895
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 116.3739
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 99.5594
4 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 80.9212
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 40.0586
6 ENSG00000115414 FN1 fibronectin 1 39.1947
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 27.2318
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 25.1027
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 21.6037
10 ENSG00000226608 FTLP3 ferritin light chain pseudogene 3 21.3332

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277103 NA -0.0798
57167 ENSG00000277099 NA -0.0798
57165 ENSG00000277096 NA -0.0798
57164 ENSG00000277095 NA -0.0798
57162 ENSG00000277089 NA -0.0798
10 ENSG00000226608 FTLP3 ferritin light chain pseudogene 3 21.3332
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 21.6037
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 25.1027
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 27.2318
6 ENSG00000115414 FN1 fibronectin 1 39.1947

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...