SHOGoiN Cell Transcriptome: GSM1269086
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1269086 Profile download | 6000003010000000000000-738 | Sequence Read Archive | SRP033135 | SRP033135_T105 | Pseudo-temporal ordering of individual cells reveals regulators of differentiation | Transcriptome | Myoblast_T24 (Skeletal muscle) | Human | Muscle | RNA-seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000251562 | MALAT1 | metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) | 118.3895 |
| 2 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 116.3739 |
| 3 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S RNA | 99.5594 |
| 4 | ENSG00000245532 | NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) | 80.9212 |
| 5 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 40.0586 |
| 6 | ENSG00000115414 | FN1 | fibronectin 1 | 39.1947 |
| 7 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 27.2318 |
| 8 | ENSG00000196205 | EEF1A1P5 | eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 | 25.1027 |
| 9 | ENSG00000198938 | MT-CO3 | mitochondrially encoded cytochrome c oxidase III | 21.6037 |
| 10 | ENSG00000226608 | FTLP3 | ferritin light chain pseudogene 3 | 21.3332 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 57170 | ENSG00000277103 | NA | -0.0798 | |
| 57167 | ENSG00000277099 | NA | -0.0798 | |
| 57165 | ENSG00000277096 | NA | -0.0798 | |
| 57164 | ENSG00000277095 | NA | -0.0798 | |
| 57162 | ENSG00000277089 | NA | -0.0798 | |
| 10 | ENSG00000226608 | FTLP3 | ferritin light chain pseudogene 3 | 21.3332 |
| 9 | ENSG00000198938 | MT-CO3 | mitochondrially encoded cytochrome c oxidase III | 21.6037 |
| 8 | ENSG00000196205 | EEF1A1P5 | eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 | 25.1027 |
| 7 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 27.2318 |
| 6 | ENSG00000115414 | FN1 | fibronectin 1 | 39.1947 |
