SHOGoiN Cell Transcriptome: GSM1269086

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269086


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T105Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 118.3895
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 116.3739
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 99.5594
4 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 80.9212
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 40.0586
6 ENSG00000115414 FN1 fibronectin 1 39.1947
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH dehydrogenase 4 27.2318
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 25.1027
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 21.6037
10 ENSG00000226608 FTLP3 ferritin, light polypeptide pseudogene 3 21.3332

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0798
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0798
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0798
60672 ENSG00000283118 NA -0.0798
60671 ENSG00000283110 NA -0.0798
60670 ENSG00000283108 NA -0.0798
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0798
60668 ENSG00000283098 NA -0.0798
60667 ENSG00000283097 NA -0.0798
60666 ENSG00000283096 NA -0.0798

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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