SHOGoiN Cell Transcriptome: GSM1269087

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269087


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T106Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 94.1888
2 ENSG00000115414 FN1 fibronectin 1 87.2243
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 71.1514
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 70.4499
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 43.0896
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 33.7672
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.7423
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 33.5980
9 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 32.6976
10 ENSG00000131711 MAP1B microtubule associated protein 1B 27.3300

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1099
57168 ENSG00000277103 NA -0.1099
57165 ENSG00000277099 NA -0.1099
57163 ENSG00000277096 NA -0.1099
57162 ENSG00000277095 NA -0.1099
10 ENSG00000131711 MAP1B microtubule associated protein 1B 27.3300
9 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 32.6976
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 33.5980
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.7423
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 33.7672

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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