SHOGoiN Cell Transcriptome: GSM1269089

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269089


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T108Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 133.7748
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 79.7883
3 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 67.9200
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 44.2259
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 40.3545
6 ENSG00000120708 TGFBI transforming growth factor beta induced 30.8599
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.0970
8 ENSG00000127603 MACF1 microtubule-actin crosslinking factor 1 28.9525
9 ENSG00000115414 FN1 fibronectin 1 27.8222
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 25.7876

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277103 NA -0.1106
57168 ENSG00000277099 NA -0.1106
57166 ENSG00000277096 NA -0.1106
57165 ENSG00000277095 NA -0.1106
57163 ENSG00000277089 NA -0.1106
57162 ENSG00000277087 NA -0.1106
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 25.7876
9 ENSG00000115414 FN1 fibronectin 1 27.8222
8 ENSG00000127603 MACF1 microtubule-actin crosslinking factor 1 28.9525
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.0970

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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