SHOGoiN Cell Transcriptome: GSM1269090

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269090


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T109Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 113.1151
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 94.6588
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 60.1812
4 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 53.1747
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 42.7105
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.3026
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 37.7497
8 ENSG00000115414 FN1 fibronectin 1 35.5011
9 ENSG00000075624 ACTB actin beta 30.5071
10 ENSG00000137801 THBS1 thrombospondin 1 29.2524

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277109 NA -0.1069
57170 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1069
57167 ENSG00000277103 NA -0.1069
57164 ENSG00000277099 NA -0.1069
57162 ENSG00000277096 NA -0.1069
10 ENSG00000137801 THBS1 thrombospondin 1 29.2524
9 ENSG00000075624 ACTB actin beta 30.5071
8 ENSG00000115414 FN1 fibronectin 1 35.5011
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 37.7497
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.3026

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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