SHOGoiN Cell Transcriptome: GSM1269092

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269092


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T111Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 95.7939
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 76.5152
3 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 70.8882
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 70.8143
5 ENSG00000226608 FTLP3 ferritin light chain pseudogene 3 64.8220
6 ENSG00000087086 FTL ferritin light chain 62.9995
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 49.9851
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 44.6845
9 ENSG00000131711 MAP1B microtubule associated protein 1B 43.4138
10 ENSG00000115414 FN1 fibronectin 1 36.8735

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277089 NA -0.0907
57169 ENSG00000277087 NA -0.0907
57168 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0907
57167 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0907
57165 ENSG00000277081 NA -0.0907
57164 ENSG00000277077 NA -0.0907
57163 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.0907
10 ENSG00000115414 FN1 fibronectin 1 36.8735
9 ENSG00000131711 MAP1B microtubule associated protein 1B 43.4138
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 44.6845

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...