SHOGoiN Cell Transcriptome: GSM1269094

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269094


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T113Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 92.9657
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 89.9409
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 75.6745
4 ENSG00000115414 FN1 fibronectin 1 49.1659
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 48.6218
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 47.7272
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 38.8188
8 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 38.7542
9 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 35.3467
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.8562

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277099 NA -0.1073
57167 ENSG00000277096 NA -0.1073
57166 ENSG00000277095 NA -0.1073
57164 ENSG00000277089 NA -0.1073
57163 ENSG00000277087 NA -0.1073
57162 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1073
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.8562
9 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 35.3467
8 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 38.7542
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 38.8188

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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