SHOGoiN Cell Transcriptome: GSM1269098

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269098


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T117Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 91.4135
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 78.5024
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 62.0796
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 55.3874
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 50.4085
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 46.8778
7 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 43.7731
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 39.5703
9 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 38.4913
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 36.6739

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1190
57169 ENSG00000277073 MIR6131 microRNA 6131 -0.1190
57168 ENSG00000277066 NA -0.1190
57166 ENSG00000277063 MIR8084 microRNA 8084 -0.1190
57165 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1190
57163 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1190
57162 ENSG00000277057 MIR6779 microRNA 6779 -0.1190
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 36.6739
9 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 38.4913
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 39.5703

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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