SHOGoiN Cell Transcriptome: GSM1269099

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269099


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T118Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 95.2068
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 80.2928
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 69.7481
4 ENSG00000167601 AXL AXL receptor tyrosine kinase 68.5440
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 68.0672
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 46.3280
7 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 42.5548
8 ENSG00000131711 MAP1B microtubule associated protein 1B 40.5460
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 40.4089
10 ENSG00000091986 CCDC80 coiled-coil domain containing 80 32.5883

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277096 NA -0.1009
57169 ENSG00000277095 NA -0.1009
57167 ENSG00000277089 NA -0.1009
57166 ENSG00000277087 NA -0.1009
57165 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1009
57164 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1009
57162 ENSG00000277081 NA -0.1009
10 ENSG00000091986 CCDC80 coiled-coil domain containing 80 32.5883
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 40.4089
8 ENSG00000131711 MAP1B microtubule associated protein 1B 40.5460

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...