SHOGoiN Cell Transcriptome: GSM1269100

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269100


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T119Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 118.5524
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 107.6889
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 69.5715
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 48.6228
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 34.6703
6 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 33.3203
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 32.2085
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.1132
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 31.7718
10 ENSG00000226608 FTLP3 ferritin light chain pseudogene 3 31.5812

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57168 ENSG00000277120 MIR6089 microRNA 6089 -0.0960
57167 ENSG00000277119 NA -0.0960
57166 ENSG00000277118 NA -0.0960
57165 ENSG00000277117 ICOS ligand -0.0960
57162 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0960
10 ENSG00000226608 FTLP3 ferritin light chain pseudogene 3 31.5812
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 31.7718
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.1132
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 32.2085
6 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 33.3203

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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