SHOGoiN Cell Transcriptome: GSM1269101

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269101


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T120Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000167601 AXL AXL receptor tyrosine kinase 97.4759
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 70.1790
3 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 65.1351
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 57.8817
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 53.7357
6 ENSG00000115414 FN1 fibronectin 1 46.2094
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 36.7906
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.0952
9 ENSG00000075624 ACTB actin beta 30.6640
10 ENSG00000184009 ACTG1 actin gamma 1 30.2855

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277120 MIR6089 microRNA 6089 -0.1188
57169 ENSG00000277119 NA -0.1188
57168 ENSG00000277118 NA -0.1188
57167 ENSG00000277117 ICOS ligand -0.1188
57164 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1188
57163 ENSG00000277109 NA -0.1188
57162 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1188
10 ENSG00000184009 ACTG1 actin gamma 1 30.2855
9 ENSG00000075624 ACTB actin beta 30.6640
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.0952

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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