SHOGoiN Cell Transcriptome: GSM1269104

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269104


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T122Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 85.9127
2 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 78.1201
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 71.8470
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 69.0454
5 ENSG00000137801 THBS1 thrombospondin 1 62.2034
6 ENSG00000115414 FN1 fibronectin 1 59.3298
7 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 56.6290
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 54.1515
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 40.2082
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.6753

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277089 NA -0.0947
57170 ENSG00000277087 NA -0.0947
57169 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0947
57168 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0947
57166 ENSG00000277081 NA -0.0947
57165 ENSG00000277077 NA -0.0947
57164 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.0947
57162 ENSG00000277073 MIR6131 microRNA 6131 -0.0947
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.6753
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 40.2082

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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