SHOGoiN Cell Transcriptome: GSM1269105

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269105


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T123Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 112.3356
2 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 101.4989
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 97.4033
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 51.8232
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 43.8914
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 27.5181
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 27.3884
8 ENSG00000115414 FN1 fibronectin 1 26.4433
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 25.1645
10 ENSG00000167552 TUBA1A tubulin alpha 1a 24.6317

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277120 MIR6089 microRNA 6089 -0.0949
57170 ENSG00000277119 NA -0.0949
57169 ENSG00000277118 NA -0.0949
57168 ENSG00000277117 ICOS ligand -0.0949
57165 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0949
57164 ENSG00000277109 NA -0.0949
57163 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0949
10 ENSG00000167552 TUBA1A tubulin alpha 1a 24.6317
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 25.1645
8 ENSG00000115414 FN1 fibronectin 1 26.4433

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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