SHOGoiN Cell Transcriptome: GSM1269107

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269107


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T124Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 92.0431
2 ENSG00000115414 FN1 fibronectin 1 82.1802
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 69.7791
4 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 59.6502
5 ENSG00000120708 TGFBI transforming growth factor beta induced 51.2942
6 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 49.5617
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 47.9743
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 42.5674
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 40.6899
10 ENSG00000133110 POSTN periostin 37.9583

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277136 NA -0.0993
57170 ENSG00000277135 NA -0.0993
57169 ENSG00000277133 NA -0.0993
57168 ENSG00000277130 NA -0.0993
57167 ENSG00000277129 NA -0.0993
57166 ENSG00000277128 NA -0.0993
57165 ENSG00000277127 NA -0.0993
57164 ENSG00000277125 NA -0.0993
57163 ENSG00000277124 NA -0.0993
10 ENSG00000133110 POSTN periostin 37.9583

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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