SHOGoiN Cell Transcriptome: GSM1269108

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269108


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T125Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 173.0588
2 ENSG00000155657 TTN titin 77.9587
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 54.5795
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 54.3359
5 ENSG00000167552 TUBA1A tubulin alpha 1a 41.7936
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 34.5048
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 25.1247
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 24.1603
9 ENSG00000180730 SHISA2 shisa family member 2 22.9421
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 22.3736

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277144 NA -0.0767
57170 ENSG00000277143 NA -0.0767
57169 ENSG00000277142 LINC00235 long intergenic non-protein coding RNA 235 -0.0767
57168 ENSG00000277141 NA -0.0767
57167 ENSG00000277138 MIR6509 microRNA 6509 -0.0767
57165 ENSG00000277136 NA -0.0767
57164 ENSG00000277135 NA -0.0767
57163 ENSG00000277133 NA -0.0767
57162 ENSG00000277130 NA -0.0767
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 22.3736

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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