SHOGoiN Cell Transcriptome: GSM1269108

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269108


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T125Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 173.0588
2 ENSG00000155657 TTN titin 77.9587
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 54.5795
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 54.3359
5 ENSG00000167552 TUBA1A tubulin, alpha 1a 41.7936
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 34.5048
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 25.1247
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 24.1603
9 ENSG00000180730 SHISA2 shisa family member 2 22.9421
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 22.3736

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0767
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0767
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0767
60672 ENSG00000283118 NA -0.0767
60671 ENSG00000283110 NA -0.0767
60670 ENSG00000283108 NA -0.0767
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0767
60668 ENSG00000283098 NA -0.0767
60667 ENSG00000283097 NA -0.0767
60666 ENSG00000283096 NA -0.0767

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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